rplI [2019-07-08 10:37:02]

ribosomal protein

locus: BSU40500

pI: 9.96

mw: 16.21 kDa

protein length: 149 aa

gene length: 450 bp

function: translation

product: ribosomal protein L9

essential: no

synonyms

Genomic Context

categories

• [category|SW 3|Information processing] → [category|SW 3.3|Protein synthesis, modification and degradation] → [category|SW 3.3.1|Translation] → [category|SW 3.3.1.4|Ribosomal proteins]

Gene

Coordinates: 4,163,197 4,163,646

The protein

Protein family

• [SW|ribosomal protein] L9P family (according to Swiss-Prot)

Structure

• [PDB|1DIV] (Geobacillus stearothermophilus)
• [PDB|3J9W] (the [SW|ribosome]) [Pubmed|25903689]

Expression and Regulation

Operons

• genes: [gene|56737276B364EC0BC7391F1BA15F225C352ED905|rplI]
  description: [Pubmed|22383849]

• genes: [gene|6640C754249DD8E4E15889CC838F5D04A682BF58|yybS]-[gene|9B624751E8BD3EA616B4B50633A558F4CE032E2C|gdpP]-[gene|56737276B364EC0BC7391F1BA15F225C352ED905|rplI]
  description: [Pubmed|22383849]

  additional information

  • term-seq has identified a potential novel regulatory RNA element including an intrinsic transcription terminator upstream of ''yybS'' [Pubmed|27120414]

Biological materials

Mutant

• BKE40500 ([gene|56737276B364EC0BC7391F1BA15F225C352ED905|rplI]::erm trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKE40500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTCATCTCTGTACGCCTCC, downstream forward: _UP4_TAATAGAAAAGAGGCTTGGA
• BKK40500 ([gene|56737276B364EC0BC7391F1BA15F225C352ED905|rplI]::kan trpC2) available at [http://www.bgsc.org/getdetail.php?bgscid=BKK40500 BGSC], [Pubmed|28189581], upstream reverse: _UP1_CTTCATCTCTGTACGCCTCC, downstream forward: _UP4_TAATAGAAAAGAGGCTTGGA

References

• 19653700,25903689